[Columbus] Problem to compile parallel version
Felix Plasser
felix.plasser at univie.ac.at
Fri Dec 4 12:17:27 EST 2015
Hi, did you use the -p option?
./install.automatic -p ... parallel
-Felix
Sent from my phone.
-------- Ursprüngliche Nachricht --------
Von: Max Pinheiro Jr <maxjr82 at gmail.com>
Datum:04.12.2015 15:15 (GMT+01:00)
An: columbus at lists.osc.edu
Cc:
Betreff: [Columbus] Problem to compile parallel version
Dear Columbus team,I am trying to compile the parallel version of Columbus code. I have successfully built the grad and standard package, but the compilation proccess stoped in the initial phase for parallel step with the following error message:/u/maxjr/codes/columbus-7.0/Columbus/makefile:87: setting LIBS to /u/maxjr/codes/columbus-7.0/Columbus/colib.a /u/maxjr/codes/columbus-7.0/Columbus/blaswrapper.a -Wl,-start-group KL_HOME/libmkl_intel_ilp64.a KL_HOME/libmkl_core.a KL_HOME/libmkl_sequential.a -Wl,-end-group -lpthread -lm -Wl,-start-group KL_HOME/libmkl_intel_ilp64.a KL_HOME/libmkl_core.a KL_HOME/libmkl_sequential.a -Wl,-end-group -lpthread -lm/u/maxjr/codes/columbus-7.0/Columbus/makefile:88: setting LIBS2 to /u/maxjr/codes/columbus-7.0/Columbus/colib.a /u/maxjr/codes/columbus-7.0/Columbus/libmolcas_col.a /u/maxjr/codes/columbus-7.0/Columbus/blaswrapper.a -Wl,-start-group KL_HOME/libmkl_intel_ilp64.a KL_HOME/libmkl_core.a KL_HOME/libmkl_sequential.a -Wl,-end-group -lpthread -lm -Wl,-start-group KL_HOME/libmkl_intel_ilp64.a KL_HOME/libmkl_core.a KL_HOME/libmkl_sequential.a -Wl,-end-group -lpthread -lm/u/maxjr/codes/columbus-7.0/Columbus/makefile:101: cpp WITH_REDIRECTON :: make: *** No rule to make target `ciudg_data.o', needed by `pciudg.x'. Stop.+ for i in '$*'+ test -f /u/maxjr/codes/columbus-7.0/Columbus/pciudg.x.2+ test -f /u/maxjr/codes/columbus-7.0/Columbus/pciudg.x.3+ test -f /u/maxjr/codes/columbus-7.0/Columbus/pciudg.x.4+ test -f /u/maxjr/codes/columbus-7.0/Columbus/pciudg.x+ mv pciudg.x /u/maxjr/codes/columbus-7.0/Columbus/pciudg.xmv: cannot stat `pciudg.x': No such file or directoryI am compiling the code with the standard libraries of intel fortran and I am using the following instructions in the install.config file:GREP /bin/grepGMAKE makeTAR /bin/tarRANLIB /usr/bin/ranlibCPPL cpp -C -E -traditionalPERL /usr/bin/perlBLASLIBRARY -Wl,-start-group $MKL_HOME/libmkl_intel_ilp64.a $MKL_HOME/libmkl_core.a $MKL_HOME/libmkl_sequential.a -Wl,-end-group -lpthread -lmLAPACKLIBRARY -Wl,-start-group $MKL_HOME/libmkl_intel_ilp64.a $MKL_HOME/libmkl_core.a $MKL_HOME/libmkl_sequential.a -Wl,-end-group -lpthread -lmMACHINEID linux64.ifc.bytereclGUNZIP /bin/gunzipGACOMMUNICATION MPIMPI_MAINDIR /afs/@cell/common/soft/intel/ics2016/impi/5.1.1/intel64/libMPI_CC mpiiccMPI_LD mpiifort -Wl,-z,muldefsMPI_FC mpiifort -Wl,-z,muldefsPSCRIPT GAVERSION GA50MPI_LIBS /afs/@cell/common/soft/intel/ics2016/impi/5.1.1/intel64/lib/libmpi_ilp64.so.4.1 -libverbs -libumadMPI_STARTUP /afs/@cell/common/soft/intel/ics2016/impi/5.1.1/bin64/mpirun -v -np _NPROC_ _EXE_ _EXEOPTS_COLUMBUS /u/maxjr/codes/columbus-7.0/ColumbusDALTON /u/maxjr/codes/columbus-7.0/Columbus/source/daltonCOLUMBUSVERSION 7.0INSTALLOPTION NOGA_INSTALLPlease, could anyone help me to find out what is going wrong? I will greatly appreciate any help you can give me to solve this problem.All the bestDr. Max Pinheiro Jr
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