[mvapich-discuss] mvapich2-2.0b installation problem with Intel compilers: SOLVED
Jacques Menu
Jacques.Menu at epfl.ch
Thu Jan 9 05:15:30 EST 2014
Hello,
It turns out libtool needs ifort when installing. Making the latter available in the path did it.
Sorry for disturbing you for nothing!
Regards,
Le 8 janv. 2014 à 10:21:35, Jacques Menu <jacques.menu at epfl.ch> a écrit :
> Hello folks,
>
> I tried to install with GCC and Intel, with the same configure command:
>
> ./configure \
> --prefix=${INSTALL_DIR} \
> \
> --with-device=ch3:psm \
> \
> --with-pm=hydra \
> --without-hwloc \
> \
> --enable-fc \
> --enable-cxx \
> \
> --disable-checkerrors \
> \
> --enable-g=dbg --enable-debuginfo \
> \
> --with-thread-package=posix \
> --enable-threads=runtime \
> \
> 2>&1 | tee configure.log
>
>
> What I get is this, which looks normal:
>
> rpmbuild at bellatrix:~/BUILD/mvapich2-intel-2.0b-13.0.1 > ll src/env/
> total 392
> 4 drwxr-xr-x 5 rpmbuild rpmbuild 4096 Jan 8 09:56 .
> 4 drwxr-xr-x 18 rpmbuild rpmbuild 4096 Jan 8 09:48 ..
> 4 drwxrwxr-x 2 rpmbuild rpmbuild 4096 Jan 8 09:56 .deps
> 0 -rw-rw-r-- 1 rpmbuild rpmbuild 0 Dec 20 10:59 .dirstamp
> 4 drwxrwxr-x 2 rpmbuild rpmbuild 4096 Dec 20 10:59 .libs
> 4 -rw-r--r-- 1 rpmbuild rpmbuild 2129 Nov 8 15:44 Makefile.mk
> 4 -rw-rw-r-- 1 rpmbuild rpmbuild 821 Jan 8 09:48 cc_shlib.conf
> 4 -rw-rw-r-- 1 rpmbuild rpmbuild 821 Jan 8 09:48 cxx_shlib.conf
> 4 -rw-rw-r-- 1 rpmbuild rpmbuild 821 Jan 8 09:48 f77_shlib.conf
> 4 -rw-rw-r-- 1 rpmbuild rpmbuild 821 Jan 8 09:48 fc_shlib.conf
> 12 -rw-rw-r-- 1 rpmbuild rpmbuild 10051 Jan 8 09:49 mpicc
> 12 -rw-rw-r-- 1 rpmbuild rpmbuild 10051 Jan 8 09:49 mpicc.bash
> 12 -rw-r--r-- 1 rpmbuild rpmbuild 9311 Nov 8 15:44 mpicc.bash.in
> 12 -rw-rw-r-- 1 rpmbuild rpmbuild 10204 Jan 8 09:49 mpicc.sh
> 12 -rw-r--r-- 1 rpmbuild rpmbuild 9461 Nov 8 15:44 mpicc.sh.in
> 8 -rw-r--r-- 1 rpmbuild rpmbuild 4657 Nov 8 15:44 mpicc.txt
> 16 -rwxrwxr-x 1 rpmbuild rpmbuild 14491 Jan 8 09:56 mpichversion
> 4 -rw-r--r-- 1 rpmbuild rpmbuild 3497 Nov 8 15:44 mpichversion.c
> 12 -rw-rw-r-- 1 rpmbuild rpmbuild 12064 Jan 8 09:56 mpichversion.o
> 12 -rw-rw-r-- 1 rpmbuild rpmbuild 9604 Jan 8 09:49 mpicxx
> 12 -rw-rw-r-- 1 rpmbuild rpmbuild 9604 Jan 8 09:49 mpicxx.bash
> 12 -rw-r--r-- 1 rpmbuild rpmbuild 8872 Nov 8 15:44 mpicxx.bash.in
> 12 -rw-rw-r-- 1 rpmbuild rpmbuild 9756 Jan 8 09:49 mpicxx.sh
> 12 -rw-r--r-- 1 rpmbuild rpmbuild 9021 Nov 8 15:44 mpicxx.sh.in
> 8 -rw-r--r-- 1 rpmbuild rpmbuild 4681 Nov 8 15:44 mpicxx.txt
> 8 -rw-r--r-- 1 rpmbuild rpmbuild 5333 Nov 8 15:44 mpiexec.txt
> 12 -rw-rw-r-- 1 rpmbuild rpmbuild 11694 Jan 8 09:49 mpif77
> 12 -rw-rw-r-- 1 rpmbuild rpmbuild 11694 Jan 8 09:49 mpif77.bash
> 12 -rw-r--r-- 1 rpmbuild rpmbuild 10961 Nov 8 15:44 mpif77.bash.in
> 12 -rw-rw-r-- 1 rpmbuild rpmbuild 11983 Jan 8 09:49 mpif77.sh
> 12 -rw-r--r-- 1 rpmbuild rpmbuild 11247 Nov 8 15:44 mpif77.sh.in
> 8 -rw-r--r-- 1 rpmbuild rpmbuild 4450 Nov 8 15:44 mpif77.txt
> 16 -rw-rw-r-- 1 rpmbuild rpmbuild 13518 Jan 8 09:49 mpif90
> 16 -rw-rw-r-- 1 rpmbuild rpmbuild 13518 Jan 8 09:49 mpif90.bash
> 16 -rw-r--r-- 1 rpmbuild rpmbuild 12815 Nov 8 15:44 mpif90.bash.in
> 16 -rw-rw-r-- 1 rpmbuild rpmbuild 13618 Jan 8 09:49 mpif90.sh
> 16 -rw-r--r-- 1 rpmbuild rpmbuild 12912 Nov 8 15:44 mpif90.sh.in
> 8 -rw-r--r-- 1 rpmbuild rpmbuild 4450 Nov 8 15:44 mpif90.txt
> 4 drwxr-xr-x 4 rpmbuild rpmbuild 4096 Jan 8 09:56 mpiname
> 4 -rw-rw-r-- 1 rpmbuild rpmbuild 832 Jan 8 09:49 mpixxx_opts.conf
> 4 -rw-r--r-- 1 rpmbuild rpmbuild 832 Nov 8 15:44 mpixxx_opts.conf.in
> 4 -rw-rw-r-- 1 rpmbuild rpmbuild 3430 Jan 8 09:49 parkill
> 4 -rw-r--r-- 1 rpmbuild rpmbuild 3423 Nov 8 15:44 parkill.in
> 4 -rwxr-xr-x 1 rpmbuild rpmbuild 2138 Nov 8 15:44 rmshm
>
> rpmbuild at bellatrix:~/BUILD/mvapich2-gcc-2.0b-4.6.3 > ll src/env/
> total 408
> 4 drwxr-xr-x 5 rpmbuild rpmbuild 4096 Dec 20 11:11 .
> 4 drwxr-xr-x 18 rpmbuild rpmbuild 4096 Dec 20 11:06 ..
> 4 drwxrwxr-x 2 rpmbuild rpmbuild 4096 Dec 20 11:11 .deps
> 0 -rw-rw-r-- 1 rpmbuild rpmbuild 0 Dec 20 11:11 .dirstamp
> 4 drwxrwxr-x 2 rpmbuild rpmbuild 4096 Dec 20 11:11 .libs
> 4 -rw-r--r-- 1 rpmbuild rpmbuild 2129 Nov 8 15:44 Makefile.mk
> 4 -rw-rw-r-- 1 rpmbuild rpmbuild 821 Dec 20 11:06 cc_shlib.conf
> 4 -rw-rw-r-- 1 rpmbuild rpmbuild 821 Dec 20 11:06 cxx_shlib.conf
> 4 -rw-rw-r-- 1 rpmbuild rpmbuild 821 Dec 20 11:06 f77_shlib.conf
> 4 -rw-rw-r-- 1 rpmbuild rpmbuild 821 Dec 20 11:06 fc_shlib.conf
> 12 -rw-rw-r-- 1 rpmbuild rpmbuild 10048 Dec 20 11:06 mpicc
> 12 -rw-rw-r-- 1 rpmbuild rpmbuild 10048 Dec 20 11:06 mpicc.bash
> 12 -rw-r--r-- 1 rpmbuild rpmbuild 9311 Nov 8 15:44 mpicc.bash.in
> 12 -rw-rw-r-- 1 rpmbuild rpmbuild 10201 Dec 20 11:06 mpicc.sh
> 12 -rw-r--r-- 1 rpmbuild rpmbuild 9461 Nov 8 15:44 mpicc.sh.in
> 8 -rw-r--r-- 1 rpmbuild rpmbuild 4657 Nov 8 15:44 mpicc.txt
> 20 -rwxrwxr-x 1 rpmbuild rpmbuild 18263 Dec 20 11:11 mpichversion
> 4 -rw-r--r-- 1 rpmbuild rpmbuild 3497 Nov 8 15:44 mpichversion.c
> 24 -rw-rw-r-- 1 rpmbuild rpmbuild 23792 Dec 20 11:11 mpichversion.o
> 12 -rw-rw-r-- 1 rpmbuild rpmbuild 9601 Dec 20 11:06 mpicxx
> 12 -rw-rw-r-- 1 rpmbuild rpmbuild 9601 Dec 20 11:06 mpicxx.bash
> 12 -rw-r--r-- 1 rpmbuild rpmbuild 8872 Nov 8 15:44 mpicxx.bash.in
> 12 -rw-rw-r-- 1 rpmbuild rpmbuild 9753 Dec 20 11:06 mpicxx.sh
> 12 -rw-r--r-- 1 rpmbuild rpmbuild 9021 Nov 8 15:44 mpicxx.sh.in
> 8 -rw-r--r-- 1 rpmbuild rpmbuild 4681 Nov 8 15:44 mpicxx.txt
> 8 -rw-r--r-- 1 rpmbuild rpmbuild 5333 Nov 8 15:44 mpiexec.txt
> 12 -rw-rw-r-- 1 rpmbuild rpmbuild 11694 Dec 20 11:06 mpif77
> 12 -rw-rw-r-- 1 rpmbuild rpmbuild 11694 Dec 20 11:06 mpif77.bash
> 12 -rw-r--r-- 1 rpmbuild rpmbuild 10961 Nov 8 15:44 mpif77.bash.in
> 12 -rw-rw-r-- 1 rpmbuild rpmbuild 11983 Dec 20 11:06 mpif77.sh
> 12 -rw-r--r-- 1 rpmbuild rpmbuild 11247 Nov 8 15:44 mpif77.sh.in
> 8 -rw-r--r-- 1 rpmbuild rpmbuild 4450 Nov 8 15:44 mpif77.txt
> 16 -rw-rw-r-- 1 rpmbuild rpmbuild 13518 Dec 20 11:06 mpif90
> 16 -rw-rw-r-- 1 rpmbuild rpmbuild 13518 Dec 20 11:06 mpif90.bash
> 16 -rw-r--r-- 1 rpmbuild rpmbuild 12815 Nov 8 15:44 mpif90.bash.in
> 16 -rw-rw-r-- 1 rpmbuild rpmbuild 13618 Dec 20 11:06 mpif90.sh
> 16 -rw-r--r-- 1 rpmbuild rpmbuild 12912 Nov 8 15:44 mpif90.sh.in
> 8 -rw-r--r-- 1 rpmbuild rpmbuild 4450 Nov 8 15:44 mpif90.txt
> 4 drwxr-xr-x 4 rpmbuild rpmbuild 4096 Dec 20 11:11 mpiname
> 4 -rw-rw-r-- 1 rpmbuild rpmbuild 832 Dec 20 11:06 mpixxx_opts.conf
> 4 -rw-r--r-- 1 rpmbuild rpmbuild 832 Nov 8 15:44 mpixxx_opts.conf.in
> 4 -rw-rw-r-- 1 rpmbuild rpmbuild 3430 Dec 20 11:06 parkill
> 4 -rw-r--r-- 1 rpmbuild rpmbuild 3423 Nov 8 15:44 parkill.in
> 4 -rwxr-xr-x 1 rpmbuild rpmbuild 2138 Nov 8 15:44 rmshm
>
>
> But after installation, I find:
>
> rpmbuild at bellatrix:~/BUILD > ll /opt/software/mvapich2/2.0b/intel/13.0.1/bin
> total 4540
> 4 drwxr-xr-x 2 root root 4096 Jan 8 10:06 .
> 4 drwxr-xr-x 5 root root 4096 Dec 20 14:25 ..
> 1024 -rwxr-xr-x 1 root root 1047499 Jan 8 10:06 hydra_nameserver
> 1024 -rwxr-xr-x 1 root root 1045068 Jan 8 10:06 hydra_persist
> 1160 -rwxr-xr-x 1 root root 1185317 Jan 8 10:06 hydra_pmi_proxy
> 0 lrwxrwxrwx 1 root root 13 Jan 8 10:06 mpiexec -> mpiexec.hydra
> 1324 -rwxr-xr-x 1 root root 1354162 Jan 8 10:06 mpiexec.hydra
> 0 lrwxrwxrwx 1 root root 13 Jan 8 10:06 mpirun -> mpiexec.hydra
>
> rpmbuild at bellatrix:~/BUILD > ll /opt/software/mvapich2/2.0b/gcc/4.6.3/bin
> total 5232
> 4 drwxr-xr-x 2 root root 4096 Dec 20 11:28 .
> 4 drwxr-xr-x 7 root root 4096 Dec 20 11:28 ..
> 1132 -rwxr-xr-x 1 root root 1155875 Dec 20 11:28 hydra_nameserver
> 1128 -rwxr-xr-x 1 root root 1152261 Dec 20 11:28 hydra_persist
> 1328 -rwxr-xr-x 1 root root 1358171 Dec 20 11:28 hydra_pmi_proxy
> 0 lrwxrwxrwx 1 root root 6 Dec 20 11:28 mpic++ -> mpicxx
> 12 -rwxr-xr-x 1 root root 10127 Dec 20 11:28 mpicc
> 20 -rwxr-xr-x 1 root root 18263 Dec 20 11:28 mpichversion
> 12 -rwxr-xr-x 1 root root 9680 Dec 20 11:28 mpicxx
> 0 lrwxrwxrwx 1 root root 13 Dec 20 11:28 mpiexec -> mpiexec.hydra
> 1544 -rwxr-xr-x 1 root root 1578250 Dec 20 11:28 mpiexec.hydra
> 12 -rwxr-xr-x 1 root root 11773 Dec 20 11:28 mpif77
> 16 -rwxr-xr-x 1 root root 13597 Dec 20 11:28 mpif90
> 16 -rwxr-xr-x 1 root root 13585 Dec 20 11:28 mpiname
> 0 lrwxrwxrwx 1 root root 13 Dec 20 11:28 mpirun -> mpiexec.hydra
> 4 -rwxr-xr-x 1 root root 3430 Dec 20 11:28 parkill
>
>
> Couldn’t find any explanation as to the missing files… Any hint is welcome!
>
> Regards,
>
> --
>
> Dr Jacques MENU
> HPC-DIT Support
> http://hpc.epfl.ch/
> mailto:1234 at epfl.ch
>
>
>
>
>
>
>
>
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