[mvapich-discuss] mvapich2-1.7 + slurm alternate location problem

[Jonathan Perkins]

Thank you for your note Brent.  I reviewed this portion of the build
system and I do see that the CPPFLAGS and LDFLAGS are not being set
for this option.  This will be fixed in our next release.

Please do let us know about your followup issue as well.

On Thu, Oct 27, 2011 at 2:25 PM, Henderson, Brent
<brent.henderson at hp.com> wrote:
> I’m hitting an error trying to configure mvapich2 v1.7 with slurm that is
> installed in an alternate location.  Sorry in advance if this issue is
> already described elsewhere, but I didn’t find searchable archives of this
> list.  The configure line that I’m using is:
>
>
>
> % ./configure --with-slurm=/opt/slurm --prefix=/tmp/test_build
> --with-pmi=slurm --with-pm=no
>
> (snip)
>
> configure: ===== configuring src/pmi/slurm =====
>
> configure: executing: /tmp/brent/mvapich2-1.7/src/pmi/slurm/configure
> '--with-slurm=/opt/slurm' '--prefix=/tmp/test_build' '--with-pmi=slurm'
> '--with-pm=no' --disable-option-checking
>
> RUNNING CONFIGURE FOR THE SLURM PMI
>
> checking for make... make
>
> (snip)
>
> checking for unistd.h... yes
>
> checking slurm/pmi.h usability... no
>
> checking slurm/pmi.h presence... no
>
> checking for slurm/pmi.h... no
>
> configure: error: could not find slurm/pmi.h.  Configure aborted
>
> configure: error: src/pmi/slurm configure failed
>
> %
>
>
>
> I would expect the build to automatically add the –I(alt_slurm_path)/include
> and –L(alt_slurm_path)/lib to the build on my behalf.  I can add them
> manually and things work as expected, but if someone has some cycles to look
> into this, that might save others a little work.  In the meantime, I used:
>
>
>
> % ./configure --with-slurm=/opt/slurm --prefix=/tmp/test_build
> --with-pmi=slurm --with-pm=no \
>
>        CPPFLAGS=-I/opt/slurm/include LDFLAGS=”-L/opt/slurm/lib
> -Wl,-rpath,/opt/slurm/lib"
>
> (snip)
>
> configure: ===== configuring src/pmi/slurm =====
>
> configure: executing: /tmp/brent/mvapich2-1.7/src/pmi/slurm/configure
> '--with-slurm=/opt/slurm' '--prefix=/opt/pgas_tools/brent_test17_nohybrid'
> '--with-pmi=slurm' '--with-pm=no' 'CPPFLAGS=-I/opt/slurm/include
> -I/tmp/brent/mvapich2-1.7/src/mpl/include
> -I/tmp/brent/mvapich2-1.7/src/mpl/include
> -I/tmp/brent/mvapich2-1.7/src/openpa/src (really long list of
> –I+/tmp/mvapich2… directories here)
> -I/tmp/brent/mvapich2-1.7/src/util/wrappers' 'LDFLAGS=-L/opt/slurm/lib
> -Wl,-rpath,/opt/slurm/lib  ' --disable-option-checking
>
> RUNNING CONFIGURE FOR THE SLURM PMI
>
> checking for make... make
>
> (snip)
>
> checking for unistd.h... yes
>
> checking slurm/pmi.h usability... yes
>
> checking slurm/pmi.h presence... yes
>
> checking for slurm/pmi.h... yes
>
> checking for fgrep... /bin/grep -F
>
> checking for PMI_Init in -lpmi... yes
>
> configure: creating ./config.status
>
> (snip)
>
>
>
> Which does successfully configure and build to use srun as the launcher.  (I
> did run into another issue which I will send in a minute, but I wanted to
> keep them separate.)  I used CPPFLAGS instead of CFLAGS as it worked with
> both the 1.7 kit and 1.7 rc1 kits that I had available locally.
>
>
>
> In case it is useful, here are some details about the system configuration:
>
>
>
> -bash-4.1$ cat /etc/redhat-release
>
> Red Hat Enterprise Linux Server release 6.1 (Santiago)
>
> -bash-4.1$ srun --version
>
> slurm 2.2.1
>
> -bash-4.1$ ls /opt/slurm
>
> bin  etc  include  lib  libexec  sbin  share
>
> -bash-4.1$ ls /opt/slurm/include
>
> slurm
>
> -bash-4.1$ ls /opt/slurm/include/slurm
>
> pmi.h  slurmdb.h  slurm_errno.h  slurm.h  spank.h
>
> -bash-4.1$ ls /opt/slurm/lib
>
> libpmi.a     libpmi.so.0.0.0  libslurmdb.so         libslurm.so
>
> libpmi.la    libslurm.a       libslurmdb.so.22      libslurm.so.22
>
> libpmi.so    libslurmdb.a     libslurmdb.so.22.0.0  libslurm.so.22.0.0
>
> libpmi.so.0  libslurmdb.la    libslurm.la           slurm
>
> -bash-4.1$
>
>
>
> Brent
>
>
>
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>
>



-- 
Jonathan Perkins
http://www.cse.ohio-state.edu/~perkinjo