[mvapich-discuss] leaked context IDs detected

Kumar, Amit ahkumar at mail.smu.edu
Thu Aug 27 13:28:00 EDT 2015


Dear MVAPICH2-2.1 compiled using GCC-5.10

I see these strange messages after job completion. I see this not just for my own programs but even for establish applications like NAMD that are compiled with mvapich2.

Any insight into what these errors/information mean could be a great help.

Please let me know if you need more information.

Regards,
Amit

leaked context IDs detected: mask=0x7f6b87f77b00 mask[0]=0x5fffffff
In direct memory block for handle type GROUP, 2 handles are still allocated
In direct memory block for handle type ATTR, 1 handles are still allocated
In direct memory block for handle type KEYVAL, 1 handles are still allocated
In direct memory block for handle type COMM, 4 handles are still allocated
leaked context IDs detected: mask=0x7f54a0d0cb00 mask[0]=0x5fffffff
In direct memory block for handle type GROUP, 2 handles are still allocated
In direct memory block for handle type ATTR, 1 handles are still allocated
In direct memory block for handle type KEYVAL, 1 handles are still allocated
In direct memory block for handle type COMM, 4 handles are still allocated
leaked context IDs detected: mask=0x7fa53a90bb00 mask[0]=0x5fffffff
In direct memory block for handle type GROUP, 2 handles are still allocated
In direct memory block for handle type ATTR, 1 handles are still allocated
In direct memory block for handle type KEYVAL, 1 handles are still allocated
In direct memory block for handle type COMM, 4 handles are still allocated
leaked context IDs detected: mask=0x7fbb9fb79b00 mask[0]=0x5fffffff
In direct memory block for handle type GROUP, 2 handles are still allocated
In direct memory block for handle type ATTR, 1 handles are still allocated
In direct memory block for handle type KEYVAL, 1 handles are still allocated
In direct memory block for handle type COMM, 4 handles are still allocated
leaked context IDs detected: mask=0x7fcadcb4db00 mask[0]=0x5fffffff
In direct memory block for handle type GROUP, 2 handles are still allocated
In direct memory block for handle type ATTR, 1 handles are still allocated
In direct memory block for handle type KEYVAL, 1 handles are still allocated
In direct memory block for handle type COMM, 4 handles are still allocated
leaked context IDs detected: mask=0x7f5f9c367b00 mask[0]=0x5fffffff
In direct memory block for handle type GROUP, 2 handles are still allocated
In direct memory block for handle type ATTR, 1 handles are still allocated
In direct memory block for handle type KEYVAL, 1 handles are still allocated
In direct memory block for handle type COMM, 4 handles are still allocated
leaked context IDs detected: mask=0x7f7ef2708b00 mask[0]=0x1fffffff
In direct memory block for handle type GROUP, 3 handles are still allocated
In direct memory block for handle type ATTR, 1 handles are still allocated
In direct memory block for handle type KEYVAL, 1 handles are still allocated
In direct memory block for handle type COMM, 4 handles are still allocated
In indirect memory block 0 for handle type COMM, 3 handles are still allocated
leaked context IDs detected: mask=0x7ff23a634b00 mask[0]=0x5fffffff
In direct memory block for handle type GROUP, 2 handles are still allocated
In direct memory block for handle type ATTR, 1 handles are still allocated
In direct memory block for handle type KEYVAL, 1 handles are still allocated
In direct memory block for handle type COMM, 4 handles are still allocated


[0] 256 at [0x000000002c18ff18], src/mpi/coll/ch3_shmem_coll.c[4146]
[0] 256 at [0x000000002c18fd68], src/mpi/coll/ch3_shmem_coll.c[4146]
[0] 256 at [0x000000002c18fbb8], src/mpi/coll/ch3_shmem_coll.c[4146]
[0] 256 at [0x000000002b6570b8], src/mpi/coll/ch3_shmem_coll.c[4146]
[0] 256 at [0x000000002b656f08], src/mpi/coll/ch3_shmem_coll.c[4146]
[0] 256 at [0x000000002b656d58], src/mpi/coll/ch3_shmem_coll.c[4146]
[1] 256 at [0x000000002aa128a8], src/mpi/coll/ch3_shmem_coll.c[4146]
[1] 256 at [0x000000002aa126f8], src/mpi/coll/ch3_shmem_coll.c[4146]
[1] 256 at [0x000000002b55b458], src/mpi/coll/ch3_shmem_coll.c[4146]
[1] 256 at [0x000000002b55b2a8], src/mpi/coll/ch3_shmem_coll.c[4146]
[1] 256 at [0x000000002b55b0f8], src/mpi/coll/ch3_shmem_coll.c[4146]
[1] 256 at [0x000000002b55af48], src/mpi/coll/ch3_shmem_coll.c[4146]
[1] 256 at [0x000000002b55ad98], src/mpi/coll/ch3_shmem_coll.c[4146]
[1] 256 at [0x000000002b55abe8], src/mpi/coll/ch3_shmem_coll.c[4146]
[1] 64 at [0x000000002b55aaf8], src/mpi/coll/ch3_shmem_coll.c[4142]
[1] 208 at [0x000000002a76f828], src/mpi/coll/ch3_shmem_coll.c[4045]
[1] 88 at [0x000000002a76f9a8], src/mpid/ch3/src/mpid_vc.c[132]
[1] 32 at [0x000000002a76f758], src/util/procmap/local_proc.c[93]
[1] 32 at [0x000000002a76f688], src/util/procmap/local_proc.c[92]
[1] 88 at [0x000000002a76f3e8], src/mpid/ch3/src/mpid_vc.c[132]
[1] 128 at [0x000000002acc95b8], src/mpi/group/grouputil.c[77]
[1] 128 at [0x000000002b2a7138], src/mpi/group/grouputil.c[77]
[1] 32 at [0x000000002aa1d6b8], src/mpi/comm/create_2level_comm.c[761]
[1] 32 at [0x000000002af7e808], src/mpi/comm/create_2level_comm.c[738]
[1] 16 at [0x0000000000aa8b78], src/mpi/topo/cart_create.c[141]
[1] 16 at [0x0000000000aae918], src/mpi/topo/cart_create.c[139]
[1] 16 at [0x0000000000aaf908], src/mpi/topo/cart_create.c[137]
[1] 64 at [0x0000000000aa73d8], src/mpi/topo/cart_create.c[131]
[1] 88 at [0x0000000000aafcf8], src/mpid/ch3/src/mpid_vc.c[132]
[1] 32 at [0x0000000000aafaa8], src/util/procmap/local_proc.c[93]
[1] 32 at [0x0000000000aaf9d8], src/util/procmap/local_proc.c[92]
[1] 88 at [0x0000000000aae818], src/mpid/ch3/src/mpid_vc.c[132]
[1] 504 at [0x0000000000aaf118], src/mpi/comm/commutil.c[337]
[1] 504 at [0x0000000000aaebd8], src/mpi/comm/commutil.c[337]

Thank you, Amit H. Kumar,  https://wiki.smu.edu/display/smuhpc/SMU+HPC+Wiki

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