[mvapich-discuss] CC topology.lo /usr/include/string.h(548): error: identifier "__locale_t" is undefined __locale_t __loc)
Jonathan Perkins
perkinjo at cse.ohio-state.edu
Thu Mar 27 15:52:33 EDT 2014
Cool, thanks for sharing your findings.
On Thu, Mar 27, 2014 at 3:50 PM, Jeff Hammond <jeff.science at gmail.com> wrote:
> The problem disappears when I change the GCC module I use, which is
> silly, but so is the way Intel compilers pretend they are GCC. I'm
> not inclined to debug further given that GCC 4.8.2 solves the problem.
>
> Thanks,
>
> Jeff
>
> On Thu, Mar 27, 2014 at 1:43 PM, Jonathan Perkins
> <perkinjo at cse.ohio-state.edu> wrote:
>> Hi Jeff. We aren't able to reproduce this issue with a newer version
>> of the intel compilers. I noticed that this is failing in hydra's
>> hwloc which is built after our embedded version of hwloc in the
>> library has already successfully built. Perhaps you can simply work
>> around this by not building hydra (--with-pm=mpirun or --with-pm=no).
>>
>> If you want to continue debugging this try removing your extra options
>> to see if this is reproducible. Also, if you have a newer intel
>> compiler at your disposal you may want to try that (Most recently we
>> have been using 14.0.1).
>>
>> On Thu, Mar 27, 2014 at 2:10 PM, Jeff Hammond <jeff.science at gmail.com> wrote:
>>> The hwloc build is failing with Intel 13.1.3. Any suggestions?
>>>
>>> Jeff
>>>
>>> [jhammond at blogin2 build-intel]$ svn info ..
>>> Path: ..
>>> URL: https://mvapich.cse.ohio-state.edu/svn/mpi/mvapich2/trunk
>>> Repository Root: https://mvapich.cse.ohio-state.edu/svn/mpi
>>> Repository UUID: 09bc9535-d30e-0410-b1f7-d46b20a4725c
>>> Revision: 7309
>>> Node Kind: directory
>>> Schedule: normal
>>> Last Changed Author: perkinjo
>>> Last Changed Rev: 7308
>>> Last Changed Date: 2014-03-26 15:49:36 -0500 (Wed, 26 Mar 2014)
>>>
>>> $ ../configure CC=/soft/intel/13.1.3/bin/icc
>>> FC=/soft/intel/13.1.3/bin/ifort F77=/soft/intel/13.1.3/bin/ifort
>>> CXX=/soft/intel/13.1.3/bin/icpc --disable-fc --disable-f77
>>> --disable-cxx --with-device=ch3:psm --with-pm=hydra
>>> --enable-threads=runtime --disable-romio
>>> --prefix=/home/jhammond/MPI/intel-mv2-trunk --enable-wrapper-rpath
>>>
>>> [jhammond at blogin2 build-intel]$ make
>>> make all-recursive
>>> make[1]: Entering directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel'
>>> Making all in /home/jhammond/MPI/mv2-trunk/build-intel/src/mpl
>>> make[2]: Entering directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel/src/mpl'
>>> make[2]: Nothing to be done for `all'.
>>> make[2]: Leaving directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel/src/mpl'
>>> Making all in /home/jhammond/MPI/mv2-trunk/build-intel/src/openpa
>>> make[2]: Entering directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel/src/openpa'
>>> Making all in src
>>> make[3]: Entering directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel/src/openpa/src'
>>> make all-am
>>> make[4]: Entering directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel/src/openpa/src'
>>> make[4]: Leaving directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel/src/openpa/src'
>>> make[3]: Leaving directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel/src/openpa/src'
>>> Making all in test
>>> make[3]: Entering directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel/src/openpa/test'
>>> make[3]: Nothing to be done for `all'.
>>> make[3]: Leaving directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel/src/openpa/test'
>>> make[3]: Entering directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel/src/openpa'
>>> make[3]: Nothing to be done for `all-am'.
>>> make[3]: Leaving directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel/src/openpa'
>>> make[2]: Leaving directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel/src/openpa'
>>> Making all in src/pm/hydra
>>> make[2]: Entering directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel/src/pm/hydra'
>>> Making all in ../../mpl
>>> make[3]: Entering directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel/src/mpl'
>>> make[3]: Nothing to be done for `all'.
>>> make[3]: Leaving directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel/src/mpl'
>>> Making all in tools/topo/hwloc/hwloc
>>> make[3]: Entering directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel/src/pm/hydra/tools/topo/hwloc/hwloc'
>>> Making all in src
>>> make[4]: Entering directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel/src/pm/hydra/tools/topo/hwloc/hwloc/src'
>>> CC topology.lo
>>> /usr/include/string.h(548): error: identifier "__locale_t" is undefined
>>> __locale_t __loc)
>>> ^
>>>
>>> /usr/include/string.h(549): error: attribute "nonnull" references
>>> nonpointer parameter
>>> __THROW __attribute_pure__ __nonnull ((1, 2, 3));
>>> ^
>>>
>>> /usr/include/string.h(552): error: identifier "__locale_t" is undefined
>>> size_t __n, __locale_t __loc)
>>> ^
>>>
>>> /usr/include/string.h(553): error: attribute "nonnull" references
>>> nonpointer parameter
>>> __THROW __attribute_pure__ __nonnull ((1, 2, 4));
>>> ^
>>>
>>> compilation aborted for
>>> ../../../../../../../../../src/pm/hydra/tools/topo/hwloc/hwloc/src/topology.c
>>> (code 2)
>>> make[4]: *** [topology.lo] Error 1
>>> make[4]: Leaving directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel/src/pm/hydra/tools/topo/hwloc/hwloc/src'
>>> make[3]: *** [all-recursive] Error 1
>>> make[3]: Leaving directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel/src/pm/hydra/tools/topo/hwloc/hwloc'
>>> make[2]: *** [all-recursive] Error 1
>>> make[2]: Leaving directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel/src/pm/hydra'
>>> make[1]: *** [all-recursive] Error 1
>>> make[1]: Leaving directory
>>> `/fusion/gpfs/home/jhammond/MPI/mv2-trunk/build-intel'
>>> make: *** [all] Error 2
>>>
>>> --
>>> Jeff Hammond
>>> jeff.science at gmail.com
>>>
>>> _______________________________________________
>>> mvapich-discuss mailing list
>>> mvapich-discuss at cse.ohio-state.edu
>>> http://mailman.cse.ohio-state.edu/mailman/listinfo/mvapich-discuss
>>>
>>>
>>
>>
>>
>> --
>> Jonathan Perkins
>> http://www.cse.ohio-state.edu/~perkinjo
>>
>
>
>
> --
> Jeff Hammond
> jeff.science at gmail.com
>
>
--
Jonathan Perkins
http://www.cse.ohio-state.edu/~perkinjo
More information about the mvapich-discuss
mailing list