[mvapich-discuss] mvapich2-GDR-2.0b installation problems

Thu Jan 23 23:11:48 EST 2014

You can find the installation under /opt/mvapich2/gdr/2.0/gnu.

On Thu, Jan 23, 2014 at 11:03 PM, Mohamad Amirul Abdullah
<amirul.abdullah at mimos.my> wrote:
> After i run with --nodeps, only this came out.
>
> [gpu0 at gpu0 Downloads]$ sudo rpm --replacepkgs --nodeps -Uvh mvapich2-gdr-2.0b-3.rhel6.rpm
> Preparing...                ########################################### [100%]
>    1:mvapich2-gdr-gnu       ########################################### [100%]
> [gpu0 at gpu0 Downloads]$
>
> after that nothing happen. how can i verify the installation work?.. i cant see mpicc for mvapich 2.0
>
> notes: i did found mvapich2-1.9 installed at /usr/mpi/gcc/mvapich2-1.9, but i was
>
> Regards,
> -Amirul-
>
>
> ________________________________________
> From: Jonathan Perkins [perkinjo at cse.ohio-state.edu]
> Sent: Friday, January 24, 2014 11:56 AM
> To: Mohamad Amirul Abdullah
> Cc: mvapich-discuss at cse.ohio-state.edu; Yong Keh Kok
> Subject: Re: [mvapich-discuss] mvapich2-GDR-2.0b installation problems
>
> There seems to be a discrepancy between what `rpm' and `locate' is
> reporting.  If you're sure that the cached results from `locate' are
> correct you can try adding the --nodeps option to rpm and see if the
> package works correctly for you.  Please let us know if this helps.
>
> On Thu, Jan 23, 2014 at 9:29 PM, Mohamad Amirul Abdullah
> <amirul.abdullah at mimos.my> wrote:
>> Hi,
>>
>> I'm having problem to install the new release mvapich2-GDR-2.0b. Everytime i
>> ran the mvapich2-gdr-gnu-2.0-3.el6.x86_64 it says it cant find libcuda.so.1:
>>
>> [gpu0 at gpu0 Downloads]$ rpm -Uvh ./mvapich2-gdr-2.0b-3.rhel6.rpm
>> error: Failed dependencies:
>>     libcuda.so.1()(64bit) is needed by mvapich2-gdr-gnu-2.0-3.el6.x86_64
>>     libcudart.so.5.5()(64bit) is needed by mvapich2-gdr-gnu-2.0-3.el6.x86_64
>>
>> here is my configuration:
>>
>> OS: CENTOS 6.4
>> [gpu0 at gpu0 Downloads]$ uname -a
>> Linux gpu0 2.6.32-358.el6.x86_64 #1 SMP Fri Feb 22 00:31:26 UTC 2013 x86_64
>> x86_64 x86_64 GNU/Linux
>>
>> NVIDIA SMI
>> [gpu0 at gpu0 Downloads]$ nvidia-smi
>> Fri Jan 24 10:15:20 2014
>> +------------------------------------------------------+
>> | NVIDIA-SMI 331.20     Driver Version: 331.20         |
>> |-------------------------------+----------------------+----------------------+
>> | GPU  Name        Persistence-M| Bus-Id        Disp.A | Volatile Uncorr.
>> ECC |
>> | Fan  Temp  Perf  Pwr:Usage/Cap|         Memory-Usage | GPU-Util  Compute
>> M. |
>> |===============================+======================+======================|
>> |   0  GeForce 9300 GE     Off  | 0000:03:00.0     N/A |
>> N/A |
>> | 40%   68C  N/A     N/A /  N/A |     63MiB /   255MiB |     N/A
>> Default |
>> +-------------------------------+----------------------+----------------------+
>> |   1  Tesla K20c          Off  | 0000:04:00.0     Off |
>> 0 |
>> | 30%   39C    P8    26W / 225W |     10MiB /  4799MiB |      0%
>> Default |
>> +-------------------------------+----------------------+----------------------+
>>
>> Mellanox
>> [gpu0 at gpu0 Downloads]$ lspci | grep Mellanox
>> 23:00.0 Network controller: Mellanox Technologies MT27500 Family
>> [ConnectX-3]
>>
>> ENVIRONMENT PATH
>> [gpu0 at gpu0 Downloads]$ echo $LD_LIBRARY_PATH
>> /usr/local/cuda/lib64:/usr/lib64
>> [gpu0 at gpu0 Downloads]$ echo $PATH
>> /usr/local/cuda/bin:/usr/local/cuda/include:/usr/lib64/qt-3.3/bin:/usr/local/bin:/usr/bin:/bin:/usr/local/sbin:/usr/sbin:/sbin:/opt/ibutils/bin:/home/gpu0/bin
>>
>> libcuda and libcudart path
>> [gpu0 at gpu0 Downloads]$ locate libcuda libcudart
>> /usr/lib/libcuda.so
>> /usr/lib/libcuda.so.1
>> /usr/lib/libcuda.so.331.20
>> /usr/lib64/libcuda.so
>> /usr/lib64/libcuda.so.1
>> /usr/lib64/libcuda.so.331.20
>> /usr/local/cuda-5.5/lib/libcudadevrt.a
>> /usr/local/cuda-5.5/lib/libcudart.so
>> /usr/local/cuda-5.5/lib/libcudart.so.5.5
>> /usr/local/cuda-5.5/lib/libcudart.so.5.5.22
>> /usr/local/cuda-5.5/lib/libcudart_static.a
>> /usr/local/cuda-5.5/lib64/libcudadevrt.a
>> /usr/local/cuda-5.5/lib64/libcudart.so
>> /usr/local/cuda-5.5/lib64/libcudart.so.5.5
>> /usr/local/cuda-5.5/lib64/libcudart.so.5.5.22
>> /usr/local/cuda-5.5/lib64/libcudart_static.a
>> /usr/local/cuda-5.5/libnsight/configuration/org.eclipse.osgi/bundles/11/1/.cp/so/linux/x86_64/libcudautil.so
>>
>> please advice
>>
>> Regards,
>> -Amirul-
>>
>>
>> _______________________________________________
>> mvapich-discuss mailing list
>> mvapich-discuss at cse.ohio-state.edu
>> http://mailman.cse.ohio-state.edu/mailman/listinfo/mvapich-discuss
>>
>
>
>
> --
> Jonathan Perkins
> http://www.cse.ohio-state.edu/~perkinjo
>
>
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-- 
Jonathan Perkins
http://www.cse.ohio-state.edu/~perkinjo