[mvapich-discuss] mvapich2 1.9 and pgi 13.10: compilation problem

[Carmelo Ponti (CSCS)]

Dear Jonathan

thank you for your prompt reply. 

I created a build with the following options:

./configure CC=pgcc CXX=pgCC FC=pgf90 F77=pgf77 --with-pmi=slurm
--with-pm=mpirun -with-slurm=/apps/pilatus/slurm/default

And attached you can find the output of 'make V=1 > make.log 2>& 1' and
the config.log

regards
Carmelo

On Wed, 2014-01-22 at 14:44 -0500, Jonathan Perkins wrote:
> Hello.  Thanks for the note.  I tried to reproduce this issue but
> wasn't able to.  I believe it may be easier to debug your issue if you
> create a build with the minimal options necessary to reproduce your
> issue and use `make V=1' so that we can see the command that emits the
> error.  Thanks in advance!
> 
> On Wed, Jan 22, 2014 at 11:10 AM, Carmelo Ponti (CSCS) <cponti at cscs.ch> wrote:
> > Hello
> >
> > I'm trying to compile mvapich2 1.9 with pgi 13.10 but I'm getting the
> > following error:
> >
> >   CC       src/mpi_t/pvar_write.lo
> >   CC       src/binding/f77/setbot.lo
> >   F77      src/binding/f77/setbotf.lo
> >   CC       src/mpi/debugger/src_mpi_debugger_libdbginitdummy_la-dbginit.lo
> >   CCLD     src/mpi/debugger/libdbginitdummy.la
> >   CC       src/mpid/ch3/channels/common/src/affinity/hwloc_bind.lo
> >   CCLD     libch3affinity.la
> >   GEN      lib/libmpich.la
> > pgf77-Error-Unknown switch: -pthread
> > make[2]: *** [lib/libmpich.la] Error 1
> > make[2]: Leaving directory `/apps/pilatus/system/src/MVAPICH2/mvapich2-1.9/mvapich2-1.9-pgi'
> > make[1]: *** [all-recursive] Error 1
> > make[1]: Leaving directory `/apps/pilatus/system/src/MVAPICH2/mvapich2-1.9/mvapich2-1.9-pgi'
> > make: *** [all] Error 2
> >
> > I find out that the problem is caused by the following configuration
> > options:
> >
> > --with-pmi=slurm --with-pm=mpirun
> >
> > I don't get any compilation problem doing the same with gcc 4.8.2 or
> > with intel 14.0.1.
> >
> > Following some more detail about my environment:
> >
> > OS: SUSE SLES 11 SP3
> > OFED: 3.5.2
> >
> > Configuration:
> >
> > ./configure --prefix=/apps/mvapich2/1.9/pgi-13.10 \
> > --enable-threads=default --enable-shared --enable-sharedlibs=gcc \
> > --enable-fc --with-mpe --enable-rsh --enable-rdma-cm --enable-fast \
> > --enable-smpcoll --with-hwloc --with-device=ch3:mrail --with-rdma=gen2 \
> > --enable-g=dbg --enable-debuginfo --with-limic2 CC=pgcc CXX=pgCC \
> > FC=pgf90 F77=pgf77 --with-slurm=/apps/slurm/default \ --with-pmi=slurm
> > --with-pm=mpirun \ CPPFLAGS=-I/apps/slurm/default/include \
> > LDFLAGS=-L/apps/slurm/default/lib
> >
> > Please let me know if you need more information.
> >
> > Thank you in advance for your help
> > Carmelo Ponti
> > --
> > ----------------------------------------------------------------------
> > Carmelo Ponti           System Engineer
> > CSCS                    Swiss Center for Scientific Computing
> > Via Trevano 131         Email: cponti at cscs.ch
> > CH-6900 Lugano          http://www.cscs.ch
> >                         Phone: +41 91 610 82 15/Fax: +41 91 610 82 82
> > ----------------------------------------------------------------------
> >
> >
> > _______________________________________________
> > mvapich-discuss mailing list
> > mvapich-discuss at cse.ohio-state.edu
> > http://mailman.cse.ohio-state.edu/mailman/listinfo/mvapich-discuss
> >
> >
> 
> 
> 

-- 
----------------------------------------------------------------------
Carmelo Ponti           System Engineer                             
CSCS                    Swiss Center for Scientific Computing 
Via Trevano 131         Email: cponti at cscs.ch                  
CH-6900 Lugano          http://www.cscs.ch              
                        Phone: +41 91 610 82 15/Fax: +41 91 610 82 82
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