[mvapich-discuss] Segmentation fault while running application
Chaitra Kumar
chaitragkumar at gmail.com
Tue Aug 5 13:57:28 EDT 2014
Hi Team,
I am trying to run Graph500 (tuned mpi version) on MVAPICH2-2.0. The
machine has infiniband.
I am using following configuration to build MVAPICH2 (have enabled
debugging options):
./configure --prefix=/home/padmanac/mvapich2 --enable-cxx
--enable-threads=multiple --with-device=ch3:mrail --with-rdma=gen2
--disable-fast --enable-g=all --enable-error-messages=all
The command which I am using is to launch Graph500 is:
mpiexec -f hostfile -np 50 -env MV2_DEBUG_CORESIZE=unlimited -env
MV2_DEBUG_SHOW_BACKTRACE=1 -env MV2_ENABLE_AFFINITY=0
./graph500_mpi_custom_50 29
This command always result in segmentation fault. From the coredump i have
got the backtrace.
Please find the trace below:
(gdb) bt
#0 0x00007f38f84b52dc in _int_free ()
from /home/padmanac/mvapich2/lib/libmpich.so.12
#1 0x00007f38f84b3a96 in free ()
from /home/padmanac/mvapich2/lib/libmpich.so.12
#2 0x00000000004054e5 in xfree ()
#3 0x000000000040ca10 in bitmap::clear() () at bitmap.cpp:54
#4 0x0000000000415cda in run_bfs(long, long*, bfs_settings const&) ()
at bfs_custom.cpp:2036
#5 0x0000000000403a5d in main () at main.cpp:370
Please let me know how to solve this? Am I missing some configuration flag?
Thanks in advance.
Regards,
Chaitra
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