[mvapich-discuss] mpirun: "bind: address family not supported
by protocol" "
Dhabaleswar Panda
panda at cse.ohio-state.edu
Wed Mar 6 15:25:12 EST 2013
Hi Bernward,
Glad to know that mvapich2-1.8.1 is working fine.
I am closing this issue on mvapich-discuss list for everybody's
information.
Thanks,
DK
On Wed, 6 Mar 2013, Bernward Platz wrote:
> Hi Dhabaleswar,
>
> mvapich2-1.8.1 is working fine.
> OK, mvapach2-1.5 is old but is part of SLES 11 and should work. Thats what I
> expect from an enterprise version...
> But never trust a software which you have not compiled yourself...
>
> Thanks
>
> Bernward
>
> 2013/2/24 Dhabaleswar Panda <panda at cse.ohio-state.edu>
> This is also a very old version of MVAPICH2 and not supported.
> Please use the latest versions (1.8.1 or 1.9a2) and let us know
> whether you encounter any issue and we will be happy to take a look
> at it.
>
> Thanks,
>
> DK
>
> On Sun, 24 Feb 2013, Bernward Platz wrote:
>
> Hi Jonathan,
>
> thanks for the answer! With the installed mvapich2-1.5 I
> have the same
> problem.
>
> Thanks
>
> Bernward
>
> 2013/2/24 Jonathan Perkins <perkinjo at cse.ohio-state.edu>
> Hello Bernward. MVAPICH-1.2 is no longer
> supported. Can you
> try using
> the latest stable MVAPICH2 release. I believe
> this issue has
> already
> been resolved there.
>
> https://mvapich.cse.ohio-state.edu/nightly/mvapich2/branches/1.8/mvapich2-l
> atest.tar.gz
>
> On Sat, Feb 23, 2013 at 10:05:31PM +0100, Bernward
> Platz wrote:
> > Hi,
> >
> > in an infiniband-cluster when I execute
> >
> >
> > mpirun_rsh -ssh -np <cpus> -hostfile hostfile
> <program>
> >
> > I always get a
> >
> > bind: Address family not supported by protocol
> >
> > I get the same error-message with all binaries
> also from the
> > mvapich-test-suite.
> >
> > ssh is configured and tested correctly (no
> prompting for
> password or
> > something else).
> > I tried it with hostnames, ip-adresses,
> localhost. Always the
> same message.
> >
> > mpirun from openmpi is working fine.
> >
> > Platform: Linux x86_64
> > OS: SLES 11p2 +
> > mpvapich: mvapich from
> MLNX_OFED_LINUX-1.5.3-3.1.0-sles11sp2-x86_64
> >
> > Output of strace:
> >
> >
> execve("/usr/mpi/gcc/mvapich-1.2.0/bin/mpirun_rsh",
> > ["/usr/mpi/gcc/mvapich-1.2.0/bin/m"..., "-ssh",
> "-np", "4",
> "-hostfile",
> > "hostfile", "./osu_alltoall", "cd", "/CFD/fs1"],
> [/* 60 vars
> */]) = 0
> > brk(0) =
> 0x613000
> > mmap(NULL, 4096, PROT_READ|PROT_WRITE,
> MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) =
> > 0x7f7aab703000
> > access("/etc/ld.so.preload", R_OK) = -1
> ENOENT (No such
> file or
> > directory)
> >
>
> open("/usr/mpi/gcc/mvapich-1.2.0/lib/shared/tls/x86_64/libm.so.6",
> > O_RDONLY) = -1 ENOENT (No such file or
> directory)
> >
> stat("/usr/mpi/gcc/mvapich-1.2.0/lib/shared/tls/x86_64",
> 0x7fff29e5edd0) =
> > -1 ENOENT (No such file or directory)
> >
> open("/usr/mpi/gcc/mvapich-1.2.0/lib/shared/tls/libm.so.6",
> O_RDONLY) = -1
> > ENOENT (No such file or directory)
> >
> stat("/usr/mpi/gcc/mvapich-1.2.0/lib/shared/tls",
> 0x7fff29e5edd0) = -1
> > ENOENT (No such file or directory)
> >
> open("/usr/mpi/gcc/mvapich-1.2.0/lib/shared/x86_64/libm.so.6",
> O_RDONLY) =
> > -1 ENOENT (No such file or directory)
> >
> stat("/usr/mpi/gcc/mvapich-1.2.0/lib/shared/x86_64",
> 0x7fff29e5edd0) = -1
> > ENOENT (No such file or directory)
> >
> open("/usr/mpi/gcc/mvapich-1.2.0/lib/shared/libm.so.6",
> O_RDONLY) = -1
> > ENOENT (No such file or directory)
> > stat("/usr/mpi/gcc/mvapich-1.2.0/lib/shared",
> {st_mode=S_IFDIR|0755,
> > st_size=4096, ...}) = 0
> > open("/etc/ld.so.cache", O_RDONLY) = 3
> > fstat(3, {st_mode=S_IFREG|0644, st_size=222401,
> ...}) = 0
> > mmap(NULL, 222401, PROT_READ, MAP_PRIVATE, 3, 0)
> =
> 0x7f7aab6cc000
> > close(3) = 0
> > open("/lib64/libm.so.6", O_RDONLY) = 3
> > read(3,
> >
>
> "\177ELF\2\1\1\0\0\0\0\0\0\0\0\0\3\0>\0\1\0\0\0\200E\0\0\0\0\0\0"...,
> 832)
> > = 832
> > fstat(3, {st_mode=S_IFREG|0755, st_size=541821,
> ...}) = 0
> > mmap(NULL, 2592072, PROT_READ|PROT_EXEC,
> MAP_PRIVATE|MAP_DENYWRITE, 3, 0) =
> > 0x7f7aab26d000
> > fadvise64(3, 0, 2592072, POSIX_FADV_WILLNEED) =
> 0
> > mprotect(0x7f7aab2c8000, 2093056, PROT_NONE) = 0
> > mmap(0x7f7aab4c7000, 126976,
> PROT_READ|PROT_WRITE,
> > MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x5a000)
> =
> 0x7f7aab4c7000
> > close(3) = 0
> >
> open("/usr/mpi/gcc/mvapich-1.2.0/lib/shared/libc.so.6",
> O_RDONLY) = -1
> > ENOENT (No such file or directory)
> > open("/lib64/libc.so.6", O_RDONLY) = 3
> > read(3,
> >
>
> "\177ELF\2\1\1\0\0\0\0\0\0\0\0\0\3\0>\0\1\0\0\0P\355\1\0\0\0\0\0"...,
> 832)
> > = 832
> > fstat(3, {st_mode=S_IFREG|0755, st_size=1754140,
> ...}) = 0
> > mmap(NULL, 4096, PROT_READ|PROT_WRITE,
> MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) =
> > 0x7f7aab6cb000
> > mmap(NULL, 3619016, PROT_READ|PROT_EXEC,
> MAP_PRIVATE|MAP_DENYWRITE, 3, 0) =
> > 0x7f7aaaef9000
> > fadvise64(3, 0, 3619016, POSIX_FADV_WILLNEED) =
> 0
> > mprotect(0x7f7aab064000, 2093056, PROT_NONE) = 0
> > mmap(0x7f7aab263000, 20480,
> PROT_READ|PROT_WRITE,
> > MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3,
> 0x16a000) =
> 0x7f7aab263000
> > mmap(0x7f7aab268000, 18632,
> PROT_READ|PROT_WRITE,
> > MAP_PRIVATE|MAP_FIXED|MAP_ANONYMOUS, -1, 0) =
> 0x7f7aab268000
> > close(3) = 0
> > mmap(NULL, 4096, PROT_READ|PROT_WRITE,
> MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) =
> > 0x7f7aab6ca000
> > mmap(NULL, 4096, PROT_READ|PROT_WRITE,
> MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) =
> > 0x7f7aab6c9000
> > arch_prctl(ARCH_SET_FS, 0x7f7aab6ca700) = 0
> > mprotect(0x7f7aab263000, 16384, PROT_READ) = 0
> > mprotect(0x7f7aab4c7000, 4096, PROT_READ) = 0
> > mprotect(0x610000, 4096, PROT_READ) = 0
> > mprotect(0x7f7aab704000, 4096, PROT_READ) = 0
> > munmap(0x7f7aab6cc000, 222401) = 0
> > brk(0) =
> 0x613000
> > brk(0x634000) =
> 0x634000
> >
> access("/usr/mpi/gcc/mvapich-1.2.0/etc/mvapich.conf",
> R_OK) =
> 0
> >
> open("/usr/mpi/gcc/mvapich-1.2.0/etc/mvapich.conf",
> O_RDONLY)
> = 3
> > fstat(3, {st_mode=S_IFREG|0644, st_size=27877,
> ...}) = 0
> > mmap(NULL, 4096, PROT_READ|PROT_WRITE,
> MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) =
> > 0x7f7aab702000
> > read(3, "#-------------------------------"...,
> 4096) = 4096
> > read(3, "TAL_SIZE=9216\n# For a PCI Expres"...,
> 4096) = 4096
> > read(3, "-------------------------\n# VIAD"...,
> 4096) = 4096
> > read(3, "n\n#-----------------------------"...,
> 4096) = 4096
> > read(3, "epost_depth + viadev_prepost_ren"...,
> 4096) = 4096
> > read(3, "#\n# Default value: 1<<10\n# The t"...,
> 4096) = 4096
> > read(3, "efault value: 1 (enabled)\n# This"...,
> 4096) = 3301
> > read(3, "", 4096) = 0
> > close(3) = 0
> > munmap(0x7f7aab702000, 4096) = 0
> > open("hostfile", O_RDONLY) = 3
> > fstat(3, {st_mode=S_IFREG|0644, st_size=40,
> ...}) = 0
> > mmap(NULL, 4096, PROT_READ|PROT_WRITE,
> MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) =
> > 0x7f7aab702000
> > read(3,
> "127.0.0.1\n127.0.0.1\n127.0.0.1\n12"..., 4096) = 40
> > close(3) = 0
> > munmap(0x7f7aab702000, 4096) = 0
> > stat(".", {st_mode=S_IFDIR|0755, st_size=4096,
> ...}) = 0
> >
> stat("/usr/mpi/gcc/mvapich-1.2.0/tests/osu_benchmarks-3.1.1",
> > {st_mode=S_IFDIR|0755, st_size=4096, ...}) = 0
> > uname({sys="Linux", node="compute01", ...}) = 0
> > socket(PF_INET, SOCK_STREAM, IPPROTO_TCP) = 3
> > bind(3, {sa_family=0xf390 /* AF_??? */,
> > sa_data="\0\0\0\0\0\0.UO\253z\177\0\0"}, 16) =
> -1 EAFNOSUPPORT
> (Address
> > family not supported by protocol)
> > dup(2) = 4
> > fcntl(4, F_GETFL) = 0x8002
> (flags
> O_RDWR|O_LARGEFILE)
> > fstat(4, {st_mode=S_IFCHR|0620,
> st_rdev=makedev(136, 2), ...})
> = 0
> > mmap(NULL, 4096, PROT_READ|PROT_WRITE,
> MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) =
> > 0x7f7aab702000
> > lseek(4, 0, SEEK_CUR) = -1
> ESPIPE (Illegal
> seek)
> > write(4, "bind: Address family not support"...,
> 47bind:
> Address family not
> > supported by protocol
> > ) = 47
> > close(4) = 0
> > munmap(0x7f7aab702000, 4096) = 0
> > exit_group(1)
> >
> > Thanks
> >
> > Bernward
>
> > _______________________________________________
> > mvapich-discuss mailing list
> > mvapich-discuss at cse.ohio-state.edu
> >
> http://mail.cse.ohio-state.edu/mailman/listinfo/mvapich-discuss
>
>
> --
> Jonathan Perkins
> http://www.cse.ohio-state.edu/~perkinjo
>
>
>
>
>
>
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