[mvapich-discuss] mpirun: "bind: address family not supported
by protocol" "
Dhabaleswar Panda
panda at cse.ohio-state.edu
Sun Feb 24 09:17:41 EST 2013
This is also a very old version of MVAPICH2 and not supported. Please use
the latest versions (1.8.1 or 1.9a2) and let us know whether you encounter
any issue and we will be happy to take a look at it.
Thanks,
DK
On Sun, 24 Feb 2013, Bernward Platz wrote:
> Hi Jonathan,
>
> thanks for the answer! With the installed mvapich2-1.5 I have the same
> problem.
>
> Thanks
>
> Bernward
>
> 2013/2/24 Jonathan Perkins <perkinjo at cse.ohio-state.edu>
> Hello Bernward. MVAPICH-1.2 is no longer supported. Can you
> try using
> the latest stable MVAPICH2 release. I believe this issue has
> already
> been resolved there.
>
> https://mvapich.cse.ohio-state.edu/nightly/mvapich2/branches/1.8/mvapich2-l
> atest.tar.gz
>
> On Sat, Feb 23, 2013 at 10:05:31PM +0100, Bernward Platz wrote:
> > Hi,
> >
> > in an infiniband-cluster when I execute
> >
> >
> > mpirun_rsh -ssh -np <cpus> -hostfile hostfile <program>
> >
> > I always get a
> >
> > bind: Address family not supported by protocol
> >
> > I get the same error-message with all binaries also from the
> > mvapich-test-suite.
> >
> > ssh is configured and tested correctly (no prompting for
> password or
> > something else).
> > I tried it with hostnames, ip-adresses, localhost. Always the
> same message.
> >
> > mpirun from openmpi is working fine.
> >
> > Platform: Linux x86_64
> > OS: SLES 11p2 +
> > mpvapich: mvapich from
> MLNX_OFED_LINUX-1.5.3-3.1.0-sles11sp2-x86_64
> >
> > Output of strace:
> >
> > execve("/usr/mpi/gcc/mvapich-1.2.0/bin/mpirun_rsh",
> > ["/usr/mpi/gcc/mvapich-1.2.0/bin/m"..., "-ssh", "-np", "4",
> "-hostfile",
> > "hostfile", "./osu_alltoall", "cd", "/CFD/fs1"], [/* 60 vars
> */]) = 0
> > brk(0) = 0x613000
> > mmap(NULL, 4096, PROT_READ|PROT_WRITE,
> MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) =
> > 0x7f7aab703000
> > access("/etc/ld.so.preload", R_OK) = -1 ENOENT (No such
> file or
> > directory)
> >
> open("/usr/mpi/gcc/mvapich-1.2.0/lib/shared/tls/x86_64/libm.so.6",
> > O_RDONLY) = -1 ENOENT (No such file or directory)
> > stat("/usr/mpi/gcc/mvapich-1.2.0/lib/shared/tls/x86_64",
> 0x7fff29e5edd0) =
> > -1 ENOENT (No such file or directory)
> > open("/usr/mpi/gcc/mvapich-1.2.0/lib/shared/tls/libm.so.6",
> O_RDONLY) = -1
> > ENOENT (No such file or directory)
> > stat("/usr/mpi/gcc/mvapich-1.2.0/lib/shared/tls",
> 0x7fff29e5edd0) = -1
> > ENOENT (No such file or directory)
> > open("/usr/mpi/gcc/mvapich-1.2.0/lib/shared/x86_64/libm.so.6",
> O_RDONLY) =
> > -1 ENOENT (No such file or directory)
> > stat("/usr/mpi/gcc/mvapich-1.2.0/lib/shared/x86_64",
> 0x7fff29e5edd0) = -1
> > ENOENT (No such file or directory)
> > open("/usr/mpi/gcc/mvapich-1.2.0/lib/shared/libm.so.6",
> O_RDONLY) = -1
> > ENOENT (No such file or directory)
> > stat("/usr/mpi/gcc/mvapich-1.2.0/lib/shared",
> {st_mode=S_IFDIR|0755,
> > st_size=4096, ...}) = 0
> > open("/etc/ld.so.cache", O_RDONLY) = 3
> > fstat(3, {st_mode=S_IFREG|0644, st_size=222401, ...}) = 0
> > mmap(NULL, 222401, PROT_READ, MAP_PRIVATE, 3, 0) =
> 0x7f7aab6cc000
> > close(3) = 0
> > open("/lib64/libm.so.6", O_RDONLY) = 3
> > read(3,
> >
> "\177ELF\2\1\1\0\0\0\0\0\0\0\0\0\3\0>\0\1\0\0\0\200E\0\0\0\0\0\0"...,
> 832)
> > = 832
> > fstat(3, {st_mode=S_IFREG|0755, st_size=541821, ...}) = 0
> > mmap(NULL, 2592072, PROT_READ|PROT_EXEC,
> MAP_PRIVATE|MAP_DENYWRITE, 3, 0) =
> > 0x7f7aab26d000
> > fadvise64(3, 0, 2592072, POSIX_FADV_WILLNEED) = 0
> > mprotect(0x7f7aab2c8000, 2093056, PROT_NONE) = 0
> > mmap(0x7f7aab4c7000, 126976, PROT_READ|PROT_WRITE,
> > MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x5a000) =
> 0x7f7aab4c7000
> > close(3) = 0
> > open("/usr/mpi/gcc/mvapich-1.2.0/lib/shared/libc.so.6",
> O_RDONLY) = -1
> > ENOENT (No such file or directory)
> > open("/lib64/libc.so.6", O_RDONLY) = 3
> > read(3,
> >
> "\177ELF\2\1\1\0\0\0\0\0\0\0\0\0\3\0>\0\1\0\0\0P\355\1\0\0\0\0\0"...,
> 832)
> > = 832
> > fstat(3, {st_mode=S_IFREG|0755, st_size=1754140, ...}) = 0
> > mmap(NULL, 4096, PROT_READ|PROT_WRITE,
> MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) =
> > 0x7f7aab6cb000
> > mmap(NULL, 3619016, PROT_READ|PROT_EXEC,
> MAP_PRIVATE|MAP_DENYWRITE, 3, 0) =
> > 0x7f7aaaef9000
> > fadvise64(3, 0, 3619016, POSIX_FADV_WILLNEED) = 0
> > mprotect(0x7f7aab064000, 2093056, PROT_NONE) = 0
> > mmap(0x7f7aab263000, 20480, PROT_READ|PROT_WRITE,
> > MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x16a000) =
> 0x7f7aab263000
> > mmap(0x7f7aab268000, 18632, PROT_READ|PROT_WRITE,
> > MAP_PRIVATE|MAP_FIXED|MAP_ANONYMOUS, -1, 0) = 0x7f7aab268000
> > close(3) = 0
> > mmap(NULL, 4096, PROT_READ|PROT_WRITE,
> MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) =
> > 0x7f7aab6ca000
> > mmap(NULL, 4096, PROT_READ|PROT_WRITE,
> MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) =
> > 0x7f7aab6c9000
> > arch_prctl(ARCH_SET_FS, 0x7f7aab6ca700) = 0
> > mprotect(0x7f7aab263000, 16384, PROT_READ) = 0
> > mprotect(0x7f7aab4c7000, 4096, PROT_READ) = 0
> > mprotect(0x610000, 4096, PROT_READ) = 0
> > mprotect(0x7f7aab704000, 4096, PROT_READ) = 0
> > munmap(0x7f7aab6cc000, 222401) = 0
> > brk(0) = 0x613000
> > brk(0x634000) = 0x634000
> > access("/usr/mpi/gcc/mvapich-1.2.0/etc/mvapich.conf", R_OK) =
> 0
> > open("/usr/mpi/gcc/mvapich-1.2.0/etc/mvapich.conf", O_RDONLY)
> = 3
> > fstat(3, {st_mode=S_IFREG|0644, st_size=27877, ...}) = 0
> > mmap(NULL, 4096, PROT_READ|PROT_WRITE,
> MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) =
> > 0x7f7aab702000
> > read(3, "#-------------------------------"..., 4096) = 4096
> > read(3, "TAL_SIZE=9216\n# For a PCI Expres"..., 4096) = 4096
> > read(3, "-------------------------\n# VIAD"..., 4096) = 4096
> > read(3, "n\n#-----------------------------"..., 4096) = 4096
> > read(3, "epost_depth + viadev_prepost_ren"..., 4096) = 4096
> > read(3, "#\n# Default value: 1<<10\n# The t"..., 4096) = 4096
> > read(3, "efault value: 1 (enabled)\n# This"..., 4096) = 3301
> > read(3, "", 4096) = 0
> > close(3) = 0
> > munmap(0x7f7aab702000, 4096) = 0
> > open("hostfile", O_RDONLY) = 3
> > fstat(3, {st_mode=S_IFREG|0644, st_size=40, ...}) = 0
> > mmap(NULL, 4096, PROT_READ|PROT_WRITE,
> MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) =
> > 0x7f7aab702000
> > read(3, "127.0.0.1\n127.0.0.1\n127.0.0.1\n12"..., 4096) = 40
> > close(3) = 0
> > munmap(0x7f7aab702000, 4096) = 0
> > stat(".", {st_mode=S_IFDIR|0755, st_size=4096, ...}) = 0
> > stat("/usr/mpi/gcc/mvapich-1.2.0/tests/osu_benchmarks-3.1.1",
> > {st_mode=S_IFDIR|0755, st_size=4096, ...}) = 0
> > uname({sys="Linux", node="compute01", ...}) = 0
> > socket(PF_INET, SOCK_STREAM, IPPROTO_TCP) = 3
> > bind(3, {sa_family=0xf390 /* AF_??? */,
> > sa_data="\0\0\0\0\0\0.UO\253z\177\0\0"}, 16) = -1 EAFNOSUPPORT
> (Address
> > family not supported by protocol)
> > dup(2) = 4
> > fcntl(4, F_GETFL) = 0x8002 (flags
> O_RDWR|O_LARGEFILE)
> > fstat(4, {st_mode=S_IFCHR|0620, st_rdev=makedev(136, 2), ...})
> = 0
> > mmap(NULL, 4096, PROT_READ|PROT_WRITE,
> MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) =
> > 0x7f7aab702000
> > lseek(4, 0, SEEK_CUR) = -1 ESPIPE (Illegal
> seek)
> > write(4, "bind: Address family not support"..., 47bind:
> Address family not
> > supported by protocol
> > ) = 47
> > close(4) = 0
> > munmap(0x7f7aab702000, 4096) = 0
> > exit_group(1)
> >
> > Thanks
> >
> > Bernward
>
> > _______________________________________________
> > mvapich-discuss mailing list
> > mvapich-discuss at cse.ohio-state.edu
> > http://mail.cse.ohio-state.edu/mailman/listinfo/mvapich-discuss
>
>
> --
> Jonathan Perkins
> http://www.cse.ohio-state.edu/~perkinjo
>
>
>
>
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