[mvapich-discuss] mpi stack smashing

[Jonathan Perkins]

Hello Renate, late last year a user posted a similar issue to our list
and it turned out to be an issue with the libssl installations across
the nodes in question.  You may want to have your system administrator
look at this.

Below is the link for reference.
http://mail.cse.ohio-state.edu/pipermail/mvapich-discuss/2010-December/003137.html

On Wed, Apr 6, 2011 at 12:09 PM, Renate Mittelmann <renate at asu.edu> wrote:
>
>> Hi
>> I run a Rocks cluster with ofed, intel-12, and environment rolls installed.
>>
>> When I try to run one of the mpi examples,
>>
>> /share/apps/mvapich/intel-12-hybrid/examples
>>
>> I choose cpi I get error messages:
>>
>>>> it compiles fine, but when I run I get
>>>>
>>>> [root at mixing examples]# mpirun -np 2 -machinefile /root/hosts cpi
>>>> *** stack smashing detected ***: /usr/bin/ssh terminated
>>>> *** stack smashing detected ***: /usr/bin/ssh terminated
>>>>
>>>> Child exited abnormally!
>>>> Killing remote processes...DONE
>>>>
>>>>
>>>> [root at mixing examples]# rocks list roll
>>>> NAME VERSION ARCH ENABLED
>>>> area51: 5.4 x86_64 yes
>>>> base: 5.4 x86_64 yes
>>>> bio: 5.4 x86_64 yes
>>>> ganglia: 5.4 x86_64 yes
>>>> hpc: 5.4 x86_64 yes
>>>> kernel: 5.4 x86_64 yes
>>>> os: 5.4 x86_64 yes
>>>> sge: 5.4 x86_64 yes
>>>> web-server: 5.4 x86_64 yes
>>>> ofed: 5.4 x86_64 yes
>>>> modules: 5.4 x86_64 yes
>>>> intel-12: 5.4 x86_64 yes
>>
>> Any idea what goes wrong?
>>
>> here is some more output which might be useful:
>>
>> mpicxx -show
>> icpc -DUSE_STDARG -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDARG_H=1 -DUSE_STDARG=1 -DMALLOC_RET_VOID=1 -L/share/apps/mvapich/intel-12-hybrid/lib -lpmpich++ -lmpich -L/usr/lib64 -Wl,-rpath=/usr/lib64 -libverbs -lpthread -lm -lpthread -lrt
>>
>> [root at mixing examples]# grep CLINKER /share/apps/mvapich/intel-12-hybrid/examples/Makefile
>> CLINKER     = /share/apps/mvapich/intel-12-hybrid/bin/mpicc
>> CCLINKER    = /share/apps/mvapich/intel-12-hybrid/bin/mpicxx
>>       $(CLINKER) -o cpi cpi.o $(MATH_LIB)
>>       $(CLINKER) -o cpip cpip.o $(MATH_LIB)
>>       $(CLINKER) -o cpilog cpilog.o -lmpe $(MATH_LIB)
>>       $(CLINKER) -o cpiwithlog cpi.o -mpilog $(MATH_LIB)
>>       $(CLINKER) -o simpleio simpleio.o
>>       $(CCLINKER) -o hello++ hello++.o
>>
>> Thanks, Renate
>>
>>
>>
>>
>
>
>
> Renate Mittelmann
> Arizona State University
> School of Mathematical and Statistical Sciences
> Tempe, AZ 85287-1804
> renate at asu.edu          http://plato.asu.edu/renate/
> (480)965-0096                fax:(480)965-0461
>
>
>
>
>
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>



-- 
Jonathan Perkins
http://www.cse.ohio-state.edu/~perkinjo