[mvapich-discuss] Rndv Receiver is receiving less than as expected

Krishna Chaitanya Kandalla kandalla at cse.ohio-state.edu
Mon Jun 28 19:06:28 EDT 2010


Hi Aaron,
                Thank you for reporting this error. Can you please let 
us know about the kind of hardware and the compiler that you are using?

Thanks,
Krishna


On 06/28/2010 06:11 PM, Aaron Knister wrote:
> Hi,
>
> I'm running mvapich2-1.4rc2 using SLURM as the PMI and having some 
> difficulties with gromacs-4.0.7. I can't find the exact number but 
> with processor counts somewhere after 40-- definitely 80 and higher 
> the gromacs application terminates after some time (the amount of time 
> varies slightly between runs) with this error:
>
>
> Warning! Rndv Receiver is receiving (13760 < 24768) less than as expected
> Fatal error in MPI_Alltoall:
> Message truncated, error stack:
> MPI_Alltoall(734)......................: MPI_Alltoall(sbuf=0x1672840, 
> scount=344, MPI_FLOAT, rbuf=0x2aaaad349360, rcount=344, MPI_FLOAT, 
> comm=0xc4000000) failed
> MPIR_Alltoall(193).....................:
> MPIDI_CH3U_Post_data_receive_found(445): Message from rank 21 and tag 
> 9 truncated; 24768 bytes received but buffer size is 13760
> Warning! Rndv Receiver is receiving (22016 < 27520) less than as expected
> Fatal error in MPI_Alltoall:
> Message truncated, error stack:
> MPI_Alltoall(734)......................: 
> MPI_Alltoall(sbuf=0x2aaaad3ce4e0, scount=344, MPI_FLOAT, 
> rbuf=0x1e6af900, rcount=344, MPI_FLOAT, comm=0xc4000004) failed
> MPIR_Alltoall(193).....................:
> MPIDI_CH3U_Post_data_receive_found(445): Message from rank 17 and tag 
> 9 truncated; 27520 bytes received but buffer size is 22016
>
> The sizes of the buffers aren't identical each time, but the rank 
> numbers that throw the errors seem to be consistent. The error doesn't 
> occur with OpenMPI which interestingly runs the code significantly 
> faster than mvapich2 although I don't know why. I've also tried 
> mvapich2-1.5rc2 and the error is still present. Please let me know if 
> you need any additional information from me.
>
> Thanks in advance!
>
> -Aaron
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