[mvapich-discuss] -with-coll configure option not working

[Dan Kokron]

I attempted to compile mvapich-1.1 on an Intel cluster using the older
collective routines (--with-coll=intra_fns).  The build
(./make.mvapich.gen2) failed with the following ...

make overtake
/u/dkokron/play/mvapich-1.1/bin/mpicc -D_EM64T_ -DEARLY_SEND_COMPLETION -DMEMORY_SCALE -DVIADEV_RPUT_SUPPORT -D_SMP_ -D_SMP_RNDV_ -DXRC -DCH_GEN2 -D_GNU_SOURCE -D__INTEL_COMPILER -I/usr/include -O3 -DHAVE_MPICHCONF_H  -DHAVE_STDLIB_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STRING_H=1 -DUSE_STDARG=1 -DHAVE_LONG_DOUBLE=1 -DHAVE_LONG_LONG_INT=1 -DHAVE_PROTOTYPES=1 -DHAVE_SIGNAL_H=1 -DHAVE_SIGACTION=1 -DHAVE_SLEEP=1 -DHAVE_SYSCONF=1   -c overtake.c
overtake.c(189): (col. 2) remark: LOOP WAS VECTORIZED.
overtake.c(223): (col. 2) remark: LOOP WAS VECTORIZED.
overtake.c(234): (col. 2) remark: LOOP WAS VECTORIZED.
overtake.c(243): (col. 2) remark: LOOP WAS VECTORIZED.
overtake.c(255): (col. 2) remark: LOOP WAS VECTORIZED.
overtake.c(263): (col. 2) remark: LOOP WAS VECTORIZED.
overtake.c(173): (col. 5) remark: LOOP WAS VECTORIZED.
overtake.c(47): (col. 5) remark: LOOP WAS VECTORIZED.
/u/dkokron/play/mvapich-1.1/bin/mpicc -D_EM64T_ -DEARLY_SEND_COMPLETION -DMEMORY_SCALE -DVIADEV_RPUT_SUPPORT -D_SMP_ -D_SMP_RNDV_ -DXRC -DCH_GEN2 -D_GNU_SOURCE -D__INTEL_COMPILER -I/usr/include -O3 -DHAVE_MPICHCONF_H  -DHAVE_STDLIB_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STRING_H=1 -DUSE_STDARG=1 -DHAVE_LONG_DOUBLE=1 -DHAVE_LONG_LONG_INT=1 -DHAVE_PROTOTYPES=1 -DHAVE_SIGNAL_H=1 -DHAVE_SIGACTION=1 -DHAVE_SLEEP=1 -DHAVE_SYSCONF=1   -c test.c
/u/dkokron/play/mvapich-1.1/bin/mpicc  -o overtake overtake.o test.o 
/u/dkokron/play/mvapich-1.1/lib/libmpich.a(initutil.o): In function `MPIR_Init':
initutil.c:(.text+0xf2): undefined reference to `disable_shmem_barrier'
initutil.c:(.text+0x11c): undefined reference to `disable_shmem_reduce'
initutil.c:(.text+0x146): undefined reference to `disable_shmem_allreduce'
initutil.c:(.text+0x170): undefined reference to `disable_shmem_bcast'
initutil.c:(.text+0x290): undefined reference to `shmem_coll_reduce_threshold'
initutil.c:(.text+0x2ad): undefined reference to `shmem_coll_allreduce_threshold'
initutil.c:(.text+0x2ca): undefined reference to `shmem_coll_bcast_threshold'
initutil.c:(.text+0x2d6): undefined reference to `shmem_coll_reduce_threshold'
initutil.c:(.text+0x2e2): undefined reference to `shmem_coll_allreduce_threshold'
initutil.c:(.text+0x316): undefined reference to `allgather_large_msg_threshold'
initutil.c:(.text+0x344): undefined reference to `allgather_small_msg_threshold'
initutil.c:(.text+0x36c): undefined reference to `bcast_knomial_degree'
/u/dkokron/play/mvapich-1.1/lib/libmpich.a(context_util.o): In function `MPIR_Context_alloc':
context_util.c:(.text+0x2f): undefined reference to `disable_shmem_allreduce'
context_util.c:(.text+0x3f): undefined reference to `disable_shmem_allreduce'
context_util.c:(.text+0x8b): undefined reference to `disable_shmem_allreduce'
context_util.c:(.text+0xaf): undefined reference to `disable_shmem_allreduce'
context_util.c:(.text+0xbf): undefined reference to `disable_shmem_allreduce'
/u/dkokron/play/mvapich-1.1/lib/libmpich.a(context_util.o):context_util.c:(.text+0x102): more undefined references to `disable_shmem_allreduce' follow
/u/dkokron/play/mvapich-1.1/lib/libmpich.a(context_util.o): In function `MPIR_Context_alloc':
context_util.c:(.text+0x171): undefined reference to `disable_shmem_bcast'
context_util.c:(.text+0x181): undefined reference to `disable_shmem_bcast'
context_util.c:(.text+0x1bb): undefined reference to `disable_shmem_bcast'
/u/dkokron/play/mvapich-1.1/lib/libmpich.a(comm_rdma_init.o): In function `comm_rdma_init':
comm_rdma_init.c:(.text+0x563): undefined reference to `disable_shmem_barrier'


The config-mine.log file is attached.

-- 
Dan Kokron
Global Modeling and Assimilation Office
NASA Goddard Space Flight Center
Greenbelt, MD 20771
Daniel.S.Kokron at nasa.gov
Phone: (301) 614-5192
Fax:   (301) 614-5304
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